Binary States

Old programmer’s joke:

There are 10 kinds of people–those who understand binary, and those who don’t.

Falling into binary thinking is often a fallacy–namely, that of the false dichotomy. But there are things that genuinely fall into one group or another. One example of these is views on acceptable conditions for beds.

Made:

Unmade:

There are advantages to each.

A made bed soothes the anxiety of people suffering from OCD. Making a bed restores order to sheets and blankets dispersed during the process of sleeping–something that must be done before going to bed again. Doing so also fulfills a Kantian sense of duty.

By contrast, leaving things as they are is something Italians do–at least according to someone I knew a while ago. The purpose is to let the mattress and sheets air out before reuse. Letting things lie also saves time at the start of day, pushing off until tomorrow (or later on, anyway) what doesn’t need to be done immediately. And as long as there are enough covers to pass the sleeping comfortably, who needs aligned bedclothes anyway? (OCD people.)

Like many a poem by Robert Frost, there are two answers, and both have their merits. Which is the right one?

Whichever one you’re having to say, “yes, dear,” to.

Yes, dear.

Adaptation

Bryan Fischer, former minister and current right-wing talkshow host, has concluded that he has the means of defeating Darwinism in four easy steps: first law, second law, fossils, and genes.

Isn’t that easy?

Well, not so much.

1. First law

By this, he means the first law of thermodynamics. Said law states that energy can neither be created nor destroyed in a closed system. Recall that matter is superconcentrated energy, as Einstein’s famous equation tells us.

Our universe is a closed system, and Fischer claims that this means that the universe cannot have come into existence on its own. Of course, how the universe actually did come into existence isn’t specified, other than to say, God did it, which qualifies as passing the intellectual buck.

What he also doesn’t recognize is the possibility that the universe–or the collective multiverse–always existed. There is nothing illogical in an infinite series, despite how disturbing that notion has been in Western philosophy.

2. Second law

The principle here is that closed systems tend toward disorder. Put another way, the energy of a system, while not destroyed, becomes unavailable to do work. The early work on this was done by this fellow:

one Rudolf Clausius, who gives the impression with his look that he might know something about disorder. But this law, along with the first, explains why perpetual motion machines are impossible. Energy available to do work runs down over time. Fischer claims that this invalidates the concept of evolution, but what he misses is that the law applies only to closed systems. The general entropy of the universe increases, but local regions can trend the opposite way. Our planet receives energy from the Sun, making us energy trust-fund babies.

3. Fossils

I like trilobites.

For whatever reason, they’ve always struck me as an aesthetically pleasing creature. Unfortunately, they went extinct some 252 million years ago, but they had a good run.

Fischer claims that there are no transitional forms in the fossil record, thus the idea of gaps. This has been tossed about in the more than 150 years since Darwin’s publication, but it’s a lot of heat without light.

For one thing, every creature in existence is a transitional form from ancestors to descendents. While species may last for a long period, there is inevitable change over time, and the fossil record shows this.

And then there’s the fact that only a tiny percentage of individual creatures actually fossilize. It’s the equivalent of looking at a set of encyclopaedias and seeing C, F, P, T, U, V, and Z. The sequence is there, but a lot is missing. That doesn’t deny the sequence. It just shows that we’re missing intermediate steps. But the overall history is clear.

Of course, what Fischer doesn’t notice is that there are no trilobites in rock layers younger than 252 million years of age. It’s odd–for his beliefs, anyway–that a consistent chronology of Earth’s living organisms can be seen all over. If as his narrative insists, lots of species died off in a single global flood, we should see a jumble of fossils, instead of an orderly pattern.

4. Genes

Here, Fischer tells us that mutations never produce good results and that changes from one species to another haven’t been observed, anyway.

The ones pictured are E. coli, a good reason for being careful about cooking meat. But evolution is also why the antibiotic, triclosan, is becoming worthless. It’s been used in soap for too long, and some nasty germs have adapted to it. That is because individual bacteria show different combinations of genes, and those differences arise through mutation. Many mutations are bad, and those cause the death of the organism. But some are beneficial.

There’s an irony, though, that somehow I think Fischer has missed. Are you familiar with the fish symbol for Christ?

They’re ubiquitous here in the south. The Greek word, ichthus, meaning fish, just so happens to be the initials of the phrase, Jesus Christ, son of God, savior, also in Greek. And there’s the frequent references to fish in the Gospels, the story involving a lot of fisherman. As does today’s subject, Bryan Fischer, but let’s not go too far down that punny path.

The fish showed up a while ago as the original bumper ornament, existing peacefully in its natural environment. Later, a bit of speciation occurred when a cross appeared as an eye on some of these fish.

But then, due to selection pressures, new species came along:

And predictably, whenever a niche is filled in nature, there will come along other species to compete for those resources:

More than that, new environments are exploited by new species:

Of course, the reality of nature is that if species that don’t adapt, particularly ones that can’t shed maladaptive behavior, end up like this:

It’s Life, Jim, But How Do We Know It?

What does “life” mean? Hold on, now, I’m not talking about the “meaning of life.” We all know that’s forty-two, anyway. No, the question that I’m getting at is how do we know that something is alive? And no, at no point in this discussion beyond this sentence will I raise the topic of abortion.

I ask the question because I watched an episode of The Universe on Netflix last night. For those of you who aren’t familiar with that program, it’s the History Channel’s attempt to present space sciences to the masses. Occasionally, it does let slip some deep thoughts, and the pictures and animations are well done. The episode that I watched was on the subject of astrobiology. As a writer of science fiction, among other kinds of writing, this is important to me.

So here again is the question: What is life? In what follows, I’ll propose a possible definition. See what you think.

1. A living organism must reduce local entropy.

Entropy, or the second law of thermodynamics, is the observation that in a closed system, energy states must run to the lowest possible level over time. Put another way, the flow always runs from organized to disorganized. (See my desk for an example.) In an internal combustion engine, for example, the fuel, which exists at a relatively high state of potential energy, is burned. That does work, but the products of combustion now are at a lower level of potential energy than before. The universe is likely a closed system, but since it started out at a high state of energy, it has a long time to run down. Earth is not a closed system, speaking in the local sense, because the Sun provides lots of new energy. Some life instead uses geothermal energy of volcanic vents on the sea floor.

Now that you see what entropy is, consider my requirement for life. A living organism must use energy from the environment to create something more complex than its surroundings. Yes, cells eat each other, but what they produce–more of themselves–is still at a higher level of organization than minerals, atmospheric gases, and the like.

I raise this qualification to answer whether fire is alive. Yes, fire consumes food and reproduces, but what it leaves behind is less organized–at a higher state of entropy–than what was there before.

2. A living organism must create discrete units.

Is a rock crystal alive? It reproduces, and its structure is often more complex than its surroundings, but a crystal is a repetition of a relatively simple pattern. Cells, by contrast, have discrete boundaries and internal parts. Some parts absorb nutrients; some contain the genetic instructions for building and reproducing the cell, and so forth. It’s interesting to speculate as to whether a crystal could develop in that manner, but for now, what we know of them says that they are mere repetitions of an organized, but simple pattern.

3. A living organism must have the capacity to reproduce.

Is our Sun alive? In some ways, it acts like a living cell, but it can’t make more of itself. By reproduction, I mean the ability to pass on the form of the living organism through a set of instructions that will assemble a new organism that is separate from the parent. Life on Earth does this through DNA. Making more of something through accumulation–such as what happened in the formation of the solar system when small rocky bodies collided and joined to form planets–isn’t reproduction in this sense.

4. A living organism must be self-contained in its functions.

Yes, living things have to have external sources of energy to live. We all must eat. But the functions of building, repairing, and reproducing the organism have to be contained within the organism.

Is an assembly line alive, for example? It takes in parts–call them food sources–and assembles them into something more complex. But an assembly line doesn’t contain all of its functions within itself. It’s made up of the cooperative efforts of smaller units, the workers. There certainly is a level of analogy here, and the definition gets strained when we consider that multicellular organisms are something like assembly lines. I’m not happy with this part of the definition, even though I have the feeling that I know what it means. This item remains to be made rigorous.

I do want this item, though, because we have to consider whether viruses are alive. A virus is a string of RNA that takes over the machinery of a cell to make more viruses. If the virus is alive, it is only alive in a derivative sense.

What this all means:

You may be wondering why I don’t simply say that a living organism has DNA. The answer is that we may come on something that looks alive on another planet that does not use our method of encoding instructions for life functions. Consider again a crystal that is complex enough to have differentiation of parts and that does more than just copy its structure ad infinitum. Can it be alive?

Or what about computer viruses, worms, and the like? When do they reach a level that qualifies them as being alive? There’s a lot of discussion about what is required for machine intelligence, but if computers gain the ability to assemble themselves, won’t they be a kind of life?

I hot that this isn’t going to be like pornography: We may not be able to define life in a rigorous sense, but we’ll know it when we see it. But even loose definitions can work as guides.

Feel free to offer suggestions for improvement in the definition or alternative ways to define the idea.